esv2760432
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:24
- Validation:Not tested
- Clinical Assertions: No
- Region Size:3,522
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 249 SVs from 50 studies. See in: genome view
Overlapping variant regions from other studies: 249 SVs from 50 studies. See in: genome view
Overlapping variant regions from other studies: 109 SVs from 20 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2760432 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,776 |
| esv2760432 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,673 |
| esv2760432 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000016.8 | Chr16 | 77,617,653 | 77,621,174 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7023984 | copy number loss | RW_0023 | SNP array | SNP genotyping analysis | 71 |
| essv7023985 | copy number loss | RW_0073 | SNP array | SNP genotyping analysis | 44 |
| essv7023986 | copy number loss | RW_0079 | SNP array | SNP genotyping analysis | 57 |
| essv7023987 | copy number loss | RW_0113 | SNP array | SNP genotyping analysis | 41 |
| essv7023989 | copy number loss | RW_0116 | SNP array | SNP genotyping analysis | 59 |
| essv7023990 | copy number loss | RW_0120 | SNP array | SNP genotyping analysis | 53 |
| essv7023991 | copy number loss | RW_0195 | SNP array | SNP genotyping analysis | 67 |
| essv7023992 | copy number loss | RW_0216 | SNP array | SNP genotyping analysis | 76 |
| essv7023993 | copy number loss | RW_0257 | SNP array | SNP genotyping analysis | 61 |
| essv7023994 | copy number loss | RW_0267 | SNP array | SNP genotyping analysis | 40 |
| essv7023995 | copy number loss | RW_0271 | SNP array | SNP genotyping analysis | 63 |
| essv7023996 | copy number loss | RW_0505 | SNP array | SNP genotyping analysis | 59 |
| essv7023997 | copy number loss | RW_0529 | SNP array | SNP genotyping analysis | 54 |
| essv7023998 | copy number loss | RW_0567 | SNP array | SNP genotyping analysis | 43 |
| essv7024000 | copy number loss | RW_0593 | SNP array | SNP genotyping analysis | 55 |
| essv7024001 | copy number loss | RW_0611 | SNP array | SNP genotyping analysis | 43 |
| essv7024002 | copy number loss | RW_0665 | SNP array | SNP genotyping analysis | 31 |
| essv7024003 | copy number loss | RW_0101 | SNP array | SNP genotyping analysis | 44 |
| essv7024004 | copy number loss | RW_0137 | SNP array | SNP genotyping analysis | 61 |
| essv7024005 | copy number loss | RW_0145 | SNP array | SNP genotyping analysis | 27 |
| essv7024006 | copy number loss | RW_0566 | SNP array | SNP genotyping analysis | 50 |
| essv7024007 | copy number loss | RW_0111 | SNP array | SNP genotyping analysis | 65 |
| essv7024008 | copy number loss | RW_0300 | SNP array | SNP genotyping analysis | 44 |
| essv7024009 | copy number loss | RW_0533 | SNP array | SNP genotyping analysis | 41 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv7023984 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7023985 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7023986 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7023987 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7023989 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7023990 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7023991 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7023992 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7023993 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7023994 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7023995 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7023996 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7023997 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7023998 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7024000 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7024001 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7024002 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,259 |
| essv7024003 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902977 6_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,776 |
| essv7024004 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902977 6_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,776 |
| essv7024005 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902977 6_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,776 |
| essv7024006 | Remapped | Perfect | NC_000016.10:g.(?_ 79026255)_(7902977 6_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,026,255 | 79,029,776 |
| essv7024007 | Remapped | Perfect | NC_000016.10:g.(?_ 79027465)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,027,465 | 79,029,259 |
| essv7024008 | Remapped | Perfect | NC_000016.10:g.(?_ 79027465)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,027,465 | 79,029,259 |
| essv7024009 | Remapped | Perfect | NC_000016.10:g.(?_ 79027465)_(7902925 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,027,465 | 79,029,259 |
| essv7023984 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7023985 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7023986 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7023987 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7023989 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7023990 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7023991 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7023992 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7023993 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7023994 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7023995 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7023996 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7023997 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7023998 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7024000 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7024001 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7024002 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,156 |
| essv7024003 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063673 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,673 |
| essv7024004 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063673 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,673 |
| essv7024005 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063673 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,673 |
| essv7024006 | Remapped | Perfect | NC_000016.9:g.(?_7 9060152)_(79063673 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,060,152 | 79,063,673 |
| essv7024007 | Remapped | Perfect | NC_000016.9:g.(?_7 9061362)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,061,362 | 79,063,156 |
| essv7024008 | Remapped | Perfect | NC_000016.9:g.(?_7 9061362)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,061,362 | 79,063,156 |
| essv7024009 | Remapped | Perfect | NC_000016.9:g.(?_7 9061362)_(79063156 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,061,362 | 79,063,156 |
| essv7023984 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7023985 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7023986 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7023987 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7023989 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7023990 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7023991 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7023992 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7023993 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7023994 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7023995 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7023996 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7023997 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7023998 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7024000 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7024001 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7024002 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,620,657 | ||
| essv7024003 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77621174 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,621,174 | ||
| essv7024004 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77621174 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,621,174 | ||
| essv7024005 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77621174 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,621,174 | ||
| essv7024006 | Submitted genomic | NC_000016.8:g.(?_7 7617653)_(77621174 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,617,653 | 77,621,174 | ||
| essv7024007 | Submitted genomic | NC_000016.8:g.(?_7 7618863)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,618,863 | 77,620,657 | ||
| essv7024008 | Submitted genomic | NC_000016.8:g.(?_7 7618863)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,618,863 | 77,620,657 | ||
| essv7024009 | Submitted genomic | NC_000016.8:g.(?_7 7618863)_(77620657 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 77,618,863 | 77,620,657 |