esv2760876
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:18
- Validation:Not tested
- Clinical Assertions: No
- Region Size:32,101
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 369 SVs from 63 studies. See in: genome view
Overlapping variant regions from other studies: 369 SVs from 63 studies. See in: genome view
Overlapping variant regions from other studies: 123 SVs from 24 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2760876 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 164,940,234 | 164,972,334 |
| esv2760876 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 165,861,386 | 165,893,486 |
| esv2760876 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000004.10 | Chr4 | 166,080,836 | 166,112,936 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7012131 | copy number gain | RW_0190 | SNP array | SNP genotyping analysis | 71 |
| essv7012132 | copy number gain | RW_0272 | SNP array | SNP genotyping analysis | 54 |
| essv7012134 | copy number gain | RW_0065 | SNP array | SNP genotyping analysis | 48 |
| essv7012135 | copy number gain | RW_0070 | SNP array | SNP genotyping analysis | 40 |
| essv7012136 | copy number gain | RW_0176 | SNP array | SNP genotyping analysis | 58 |
| essv7012137 | copy number gain | RW_0177 | SNP array | SNP genotyping analysis | 37 |
| essv7012138 | copy number gain | RW_0181 | SNP array | SNP genotyping analysis | 65 |
| essv7012139 | copy number gain | RW_0189 | SNP array | SNP genotyping analysis | 72 |
| essv7012140 | copy number gain | RW_0192 | SNP array | SNP genotyping analysis | 55 |
| essv7012141 | copy number gain | RW_0210 | SNP array | SNP genotyping analysis | 50 |
| essv7012142 | copy number gain | RW_0211 | SNP array | SNP genotyping analysis | 62 |
| essv7012143 | copy number gain | RW_0224 | SNP array | SNP genotyping analysis | 57 |
| essv7012145 | copy number gain | RW_0243 | SNP array | SNP genotyping analysis | 47 |
| essv7012146 | copy number gain | RW_0260 | SNP array | SNP genotyping analysis | 46 |
| essv7012147 | copy number gain | RW_0271 | SNP array | SNP genotyping analysis | 63 |
| essv7012148 | copy number gain | RW_0540 | SNP array | SNP genotyping analysis | 47 |
| essv7012149 | copy number gain | RW_0587 | SNP array | SNP genotyping analysis | 53 |
| essv7012150 | copy number gain | RW_0207 | SNP array | SNP genotyping analysis | 53 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv7012131 | Remapped | Perfect | NC_000004.12:g.(?_ 164940234)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,940,234 | 164,961,141 |
| essv7012132 | Remapped | Perfect | NC_000004.12:g.(?_ 164940234)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,940,234 | 164,961,141 |
| essv7012134 | Remapped | Perfect | NC_000004.12:g.(?_ 164948386)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,948,386 | 164,961,141 |
| essv7012135 | Remapped | Perfect | NC_000004.12:g.(?_ 164948386)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,948,386 | 164,961,141 |
| essv7012136 | Remapped | Perfect | NC_000004.12:g.(?_ 164948386)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,948,386 | 164,961,141 |
| essv7012137 | Remapped | Perfect | NC_000004.12:g.(?_ 164948386)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,948,386 | 164,961,141 |
| essv7012138 | Remapped | Perfect | NC_000004.12:g.(?_ 164948386)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,948,386 | 164,961,141 |
| essv7012139 | Remapped | Perfect | NC_000004.12:g.(?_ 164948386)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,948,386 | 164,961,141 |
| essv7012140 | Remapped | Perfect | NC_000004.12:g.(?_ 164948386)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,948,386 | 164,961,141 |
| essv7012141 | Remapped | Perfect | NC_000004.12:g.(?_ 164948386)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,948,386 | 164,961,141 |
| essv7012142 | Remapped | Perfect | NC_000004.12:g.(?_ 164948386)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,948,386 | 164,961,141 |
| essv7012143 | Remapped | Perfect | NC_000004.12:g.(?_ 164948386)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,948,386 | 164,961,141 |
| essv7012145 | Remapped | Perfect | NC_000004.12:g.(?_ 164948386)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,948,386 | 164,961,141 |
| essv7012146 | Remapped | Perfect | NC_000004.12:g.(?_ 164948386)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,948,386 | 164,961,141 |
| essv7012147 | Remapped | Perfect | NC_000004.12:g.(?_ 164948386)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,948,386 | 164,961,141 |
| essv7012148 | Remapped | Perfect | NC_000004.12:g.(?_ 164948386)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,948,386 | 164,961,141 |
| essv7012149 | Remapped | Perfect | NC_000004.12:g.(?_ 164948386)_(164961 141_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,948,386 | 164,961,141 |
| essv7012150 | Remapped | Perfect | NC_000004.12:g.(?_ 164948386)_(164972 334_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 164,948,386 | 164,972,334 |
| essv7012131 | Remapped | Perfect | NC_000004.11:g.(?_ 165861386)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,861,386 | 165,882,293 |
| essv7012132 | Remapped | Perfect | NC_000004.11:g.(?_ 165861386)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,861,386 | 165,882,293 |
| essv7012134 | Remapped | Perfect | NC_000004.11:g.(?_ 165869538)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,869,538 | 165,882,293 |
| essv7012135 | Remapped | Perfect | NC_000004.11:g.(?_ 165869538)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,869,538 | 165,882,293 |
| essv7012136 | Remapped | Perfect | NC_000004.11:g.(?_ 165869538)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,869,538 | 165,882,293 |
| essv7012137 | Remapped | Perfect | NC_000004.11:g.(?_ 165869538)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,869,538 | 165,882,293 |
| essv7012138 | Remapped | Perfect | NC_000004.11:g.(?_ 165869538)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,869,538 | 165,882,293 |
| essv7012139 | Remapped | Perfect | NC_000004.11:g.(?_ 165869538)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,869,538 | 165,882,293 |
| essv7012140 | Remapped | Perfect | NC_000004.11:g.(?_ 165869538)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,869,538 | 165,882,293 |
| essv7012141 | Remapped | Perfect | NC_000004.11:g.(?_ 165869538)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,869,538 | 165,882,293 |
| essv7012142 | Remapped | Perfect | NC_000004.11:g.(?_ 165869538)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,869,538 | 165,882,293 |
| essv7012143 | Remapped | Perfect | NC_000004.11:g.(?_ 165869538)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,869,538 | 165,882,293 |
| essv7012145 | Remapped | Perfect | NC_000004.11:g.(?_ 165869538)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,869,538 | 165,882,293 |
| essv7012146 | Remapped | Perfect | NC_000004.11:g.(?_ 165869538)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,869,538 | 165,882,293 |
| essv7012147 | Remapped | Perfect | NC_000004.11:g.(?_ 165869538)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,869,538 | 165,882,293 |
| essv7012148 | Remapped | Perfect | NC_000004.11:g.(?_ 165869538)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,869,538 | 165,882,293 |
| essv7012149 | Remapped | Perfect | NC_000004.11:g.(?_ 165869538)_(165882 293_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,869,538 | 165,882,293 |
| essv7012150 | Remapped | Perfect | NC_000004.11:g.(?_ 165869538)_(165893 486_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 165,869,538 | 165,893,486 |
| essv7012131 | Submitted genomic | NC_000004.10:g.(?_ 166080836)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,080,836 | 166,101,743 | ||
| essv7012132 | Submitted genomic | NC_000004.10:g.(?_ 166080836)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,080,836 | 166,101,743 | ||
| essv7012134 | Submitted genomic | NC_000004.10:g.(?_ 166088988)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,088,988 | 166,101,743 | ||
| essv7012135 | Submitted genomic | NC_000004.10:g.(?_ 166088988)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,088,988 | 166,101,743 | ||
| essv7012136 | Submitted genomic | NC_000004.10:g.(?_ 166088988)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,088,988 | 166,101,743 | ||
| essv7012137 | Submitted genomic | NC_000004.10:g.(?_ 166088988)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,088,988 | 166,101,743 | ||
| essv7012138 | Submitted genomic | NC_000004.10:g.(?_ 166088988)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,088,988 | 166,101,743 | ||
| essv7012139 | Submitted genomic | NC_000004.10:g.(?_ 166088988)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,088,988 | 166,101,743 | ||
| essv7012140 | Submitted genomic | NC_000004.10:g.(?_ 166088988)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,088,988 | 166,101,743 | ||
| essv7012141 | Submitted genomic | NC_000004.10:g.(?_ 166088988)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,088,988 | 166,101,743 | ||
| essv7012142 | Submitted genomic | NC_000004.10:g.(?_ 166088988)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,088,988 | 166,101,743 | ||
| essv7012143 | Submitted genomic | NC_000004.10:g.(?_ 166088988)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,088,988 | 166,101,743 | ||
| essv7012145 | Submitted genomic | NC_000004.10:g.(?_ 166088988)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,088,988 | 166,101,743 | ||
| essv7012146 | Submitted genomic | NC_000004.10:g.(?_ 166088988)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,088,988 | 166,101,743 | ||
| essv7012147 | Submitted genomic | NC_000004.10:g.(?_ 166088988)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,088,988 | 166,101,743 | ||
| essv7012148 | Submitted genomic | NC_000004.10:g.(?_ 166088988)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,088,988 | 166,101,743 | ||
| essv7012149 | Submitted genomic | NC_000004.10:g.(?_ 166088988)_(166101 743_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,088,988 | 166,101,743 | ||
| essv7012150 | Submitted genomic | NC_000004.10:g.(?_ 166088988)_(166112 936_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 166,088,988 | 166,112,936 |