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dbVar

Database of genomic structural variation

esv2761105

Organism: Homo sapiens

Study:estd203 (Vogler et al. 2010)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:182,137

Publication(s):Vogler et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 665 SVs from 74 studies. See in: genome view

Remapped(Score: Perfect):126,179,485-126,361,621

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Outer Stop
esv2761105	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	126,179,485	126,361,621
esv2761105	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000007.13	Chr7	125,819,539	126,001,675
esv2761105	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000007.12	Chr7	125,606,775	125,788,911

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv7015017	copy number loss	RW_0500	SNP array	SNP genotyping analysis	55
essv7015018	copy number loss	RW_0644	SNP array	SNP genotyping analysis	56

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
essv7015017	Remapped	Perfect	NC_000007.14:g.(?_ 126179485)_(126361 621_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	126,179,485	126,361,621
essv7015018	Remapped	Perfect	NC_000007.14:g.(?_ 126179485)_(126361 621_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	126,179,485	126,361,621
essv7015017	Remapped	Perfect	NC_000007.13:g.(?_ 125819539)_(126001 675_?)del	GRCh37.p13	First Pass	NC_000007.13	Chr7	125,819,539	126,001,675
essv7015018	Remapped	Perfect	NC_000007.13:g.(?_ 125819539)_(126001 675_?)del	GRCh37.p13	First Pass	NC_000007.13	Chr7	125,819,539	126,001,675
essv7015017	Submitted genomic		NC_000007.12:g.(?_ 125606775)_(125788 911_?)del	NCBI36 (hg18)		NC_000007.12	Chr7	125,606,775	125,788,911
essv7015018	Submitted genomic		NC_000007.12:g.(?_ 125606775)_(125788 911_?)del	NCBI36 (hg18)		NC_000007.12	Chr7	125,606,775	125,788,911

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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