esv2761165

Organism: Homo sapiens

Study:estd203 (Vogler et al. 2010)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:9
Validation:Not tested
Clinical Assertions: No
Region Size:61,492

Publication(s):Vogler et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 681 SVs from 72 studies. See in: genome view

Remapped(Score: Perfect):83,531,714-83,593,205

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Outer Stop
esv2761165	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000013.11	Chr13	83,531,714	83,593,205
esv2761165	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000013.10	Chr13	84,105,849	84,167,340
esv2761165	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000013.9	Chr13	83,003,850	83,065,341

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv6998208	copy number loss	SW_0538	SNP array	SNP genotyping analysis	20
essv6998209	copy number loss	SW_0583	SNP array	SNP genotyping analysis	23
essv6998210	copy number loss	SW_0813	SNP array	SNP genotyping analysis	46
essv6998212	copy number loss	SW_1018	SNP array	SNP genotyping analysis	21
essv6998213	copy number loss	SW_1029	SNP array	SNP genotyping analysis	42
essv6998214	copy number loss	SW_1031	SNP array	SNP genotyping analysis	41
essv6998215	copy number loss	SW_1042	SNP array	SNP genotyping analysis	33
essv6998216	copy number loss	SW_0641	SNP array	SNP genotyping analysis	37
essv6998217	copy number loss	SW_1195	SNP array	SNP genotyping analysis	22

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
essv6998208	Remapped	Perfect	NC_000013.11:g.(?_ 83531714)_(8358187 7_?)del	GRCh38.p12	First Pass	NC_000013.11	Chr13	83,531,714	83,581,877
essv6998209	Remapped	Perfect	NC_000013.11:g.(?_ 83531714)_(8358187 7_?)del	GRCh38.p12	First Pass	NC_000013.11	Chr13	83,531,714	83,581,877
essv6998210	Remapped	Perfect	NC_000013.11:g.(?_ 83531714)_(8358187 7_?)del	GRCh38.p12	First Pass	NC_000013.11	Chr13	83,531,714	83,581,877
essv6998212	Remapped	Perfect	NC_000013.11:g.(?_ 83531714)_(8358187 7_?)del	GRCh38.p12	First Pass	NC_000013.11	Chr13	83,531,714	83,581,877
essv6998213	Remapped	Perfect	NC_000013.11:g.(?_ 83531714)_(8358187 7_?)del	GRCh38.p12	First Pass	NC_000013.11	Chr13	83,531,714	83,581,877
essv6998214	Remapped	Perfect	NC_000013.11:g.(?_ 83531714)_(8358187 7_?)del	GRCh38.p12	First Pass	NC_000013.11	Chr13	83,531,714	83,581,877
essv6998215	Remapped	Perfect	NC_000013.11:g.(?_ 83531714)_(8358187 7_?)del	GRCh38.p12	First Pass	NC_000013.11	Chr13	83,531,714	83,581,877
essv6998216	Remapped	Perfect	NC_000013.11:g.(?_ 83531714)_(8358711 6_?)del	GRCh38.p12	First Pass	NC_000013.11	Chr13	83,531,714	83,587,116
essv6998217	Remapped	Perfect	NC_000013.11:g.(?_ 83531714)_(8359320 5_?)del	GRCh38.p12	First Pass	NC_000013.11	Chr13	83,531,714	83,593,205
essv6998208	Remapped	Perfect	NC_000013.10:g.(?_ 84105849)_(8415601 2_?)del	GRCh37.p13	First Pass	NC_000013.10	Chr13	84,105,849	84,156,012
essv6998209	Remapped	Perfect	NC_000013.10:g.(?_ 84105849)_(8415601 2_?)del	GRCh37.p13	First Pass	NC_000013.10	Chr13	84,105,849	84,156,012
essv6998210	Remapped	Perfect	NC_000013.10:g.(?_ 84105849)_(8415601 2_?)del	GRCh37.p13	First Pass	NC_000013.10	Chr13	84,105,849	84,156,012
essv6998212	Remapped	Perfect	NC_000013.10:g.(?_ 84105849)_(8415601 2_?)del	GRCh37.p13	First Pass	NC_000013.10	Chr13	84,105,849	84,156,012
essv6998213	Remapped	Perfect	NC_000013.10:g.(?_ 84105849)_(8415601 2_?)del	GRCh37.p13	First Pass	NC_000013.10	Chr13	84,105,849	84,156,012
essv6998214	Remapped	Perfect	NC_000013.10:g.(?_ 84105849)_(8415601 2_?)del	GRCh37.p13	First Pass	NC_000013.10	Chr13	84,105,849	84,156,012
essv6998215	Remapped	Perfect	NC_000013.10:g.(?_ 84105849)_(8415601 2_?)del	GRCh37.p13	First Pass	NC_000013.10	Chr13	84,105,849	84,156,012
essv6998216	Remapped	Perfect	NC_000013.10:g.(?_ 84105849)_(8416125 1_?)del	GRCh37.p13	First Pass	NC_000013.10	Chr13	84,105,849	84,161,251
essv6998217	Remapped	Perfect	NC_000013.10:g.(?_ 84105849)_(8416734 0_?)del	GRCh37.p13	First Pass	NC_000013.10	Chr13	84,105,849	84,167,340
essv6998208	Submitted genomic		NC_000013.9:g.(?_8 3003850)_(83054013 _?)del	NCBI36 (hg18)		NC_000013.9	Chr13	83,003,850	83,054,013
essv6998209	Submitted genomic		NC_000013.9:g.(?_8 3003850)_(83054013 _?)del	NCBI36 (hg18)		NC_000013.9	Chr13	83,003,850	83,054,013
essv6998210	Submitted genomic		NC_000013.9:g.(?_8 3003850)_(83054013 _?)del	NCBI36 (hg18)		NC_000013.9	Chr13	83,003,850	83,054,013
essv6998212	Submitted genomic		NC_000013.9:g.(?_8 3003850)_(83054013 _?)del	NCBI36 (hg18)		NC_000013.9	Chr13	83,003,850	83,054,013
essv6998213	Submitted genomic		NC_000013.9:g.(?_8 3003850)_(83054013 _?)del	NCBI36 (hg18)		NC_000013.9	Chr13	83,003,850	83,054,013
essv6998214	Submitted genomic		NC_000013.9:g.(?_8 3003850)_(83054013 _?)del	NCBI36 (hg18)		NC_000013.9	Chr13	83,003,850	83,054,013
essv6998215	Submitted genomic		NC_000013.9:g.(?_8 3003850)_(83054013 _?)del	NCBI36 (hg18)		NC_000013.9	Chr13	83,003,850	83,054,013
essv6998216	Submitted genomic		NC_000013.9:g.(?_8 3003850)_(83059252 _?)del	NCBI36 (hg18)		NC_000013.9	Chr13	83,003,850	83,059,252
essv6998217	Submitted genomic		NC_000013.9:g.(?_8 3003850)_(83065341 _?)del	NCBI36 (hg18)		NC_000013.9	Chr13	83,003,850	83,065,341

dbVar

Database of genomic structural variation

esv2761165

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant