esv2761182
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:13
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,652
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 548 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 548 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 360 SVs from 27 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2761182 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 143,622,987 | 143,625,638 |
| esv2761182 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000008.10 | Chr8 | 144,705,157 | 144,707,808 |
| esv2761182 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000008.9 | Chr8 | 144,776,300 | 144,778,951 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7017349 | copy number loss | RW_0022 | SNP array | SNP genotyping analysis | 37 |
| essv7017350 | copy number loss | RW_0114 | SNP array | SNP genotyping analysis | 36 |
| essv7017351 | copy number loss | RW_0120 | SNP array | SNP genotyping analysis | 53 |
| essv7017352 | copy number loss | RW_0142 | SNP array | SNP genotyping analysis | 36 |
| essv7017353 | copy number loss | RW_0170 | SNP array | SNP genotyping analysis | 56 |
| essv7017354 | copy number loss | RW_0171 | SNP array | SNP genotyping analysis | 65 |
| essv7017356 | copy number loss | RW_0197 | SNP array | SNP genotyping analysis | 51 |
| essv7017357 | copy number loss | RW_0201 | SNP array | SNP genotyping analysis | 57 |
| essv7017358 | copy number loss | RW_0226 | SNP array | SNP genotyping analysis | 58 |
| essv7017359 | copy number loss | RW_0258 | SNP array | SNP genotyping analysis | 70 |
| essv7017360 | copy number loss | RW_0272 | SNP array | SNP genotyping analysis | 54 |
| essv7017361 | copy number loss | RW_0281 | SNP array | SNP genotyping analysis | 58 |
| essv7017362 | copy number loss | RW_0637 | SNP array | SNP genotyping analysis | 56 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv7017349 | Remapped | Perfect | NC_000008.11:g.(?_ 143622987)_(143625 638_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 143,622,987 | 143,625,638 |
| essv7017350 | Remapped | Perfect | NC_000008.11:g.(?_ 143622987)_(143625 638_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 143,622,987 | 143,625,638 |
| essv7017351 | Remapped | Perfect | NC_000008.11:g.(?_ 143622987)_(143625 638_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 143,622,987 | 143,625,638 |
| essv7017352 | Remapped | Perfect | NC_000008.11:g.(?_ 143622987)_(143625 638_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 143,622,987 | 143,625,638 |
| essv7017353 | Remapped | Perfect | NC_000008.11:g.(?_ 143622987)_(143625 638_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 143,622,987 | 143,625,638 |
| essv7017354 | Remapped | Perfect | NC_000008.11:g.(?_ 143622987)_(143625 638_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 143,622,987 | 143,625,638 |
| essv7017356 | Remapped | Perfect | NC_000008.11:g.(?_ 143622987)_(143625 638_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 143,622,987 | 143,625,638 |
| essv7017357 | Remapped | Perfect | NC_000008.11:g.(?_ 143622987)_(143625 638_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 143,622,987 | 143,625,638 |
| essv7017358 | Remapped | Perfect | NC_000008.11:g.(?_ 143622987)_(143625 638_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 143,622,987 | 143,625,638 |
| essv7017359 | Remapped | Perfect | NC_000008.11:g.(?_ 143622987)_(143625 638_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 143,622,987 | 143,625,638 |
| essv7017360 | Remapped | Perfect | NC_000008.11:g.(?_ 143622987)_(143625 638_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 143,622,987 | 143,625,638 |
| essv7017361 | Remapped | Perfect | NC_000008.11:g.(?_ 143622987)_(143625 638_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 143,622,987 | 143,625,638 |
| essv7017362 | Remapped | Perfect | NC_000008.11:g.(?_ 143622987)_(143625 638_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 143,622,987 | 143,625,638 |
| essv7017349 | Remapped | Perfect | NC_000008.10:g.(?_ 144705157)_(144707 808_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 144,705,157 | 144,707,808 |
| essv7017350 | Remapped | Perfect | NC_000008.10:g.(?_ 144705157)_(144707 808_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 144,705,157 | 144,707,808 |
| essv7017351 | Remapped | Perfect | NC_000008.10:g.(?_ 144705157)_(144707 808_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 144,705,157 | 144,707,808 |
| essv7017352 | Remapped | Perfect | NC_000008.10:g.(?_ 144705157)_(144707 808_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 144,705,157 | 144,707,808 |
| essv7017353 | Remapped | Perfect | NC_000008.10:g.(?_ 144705157)_(144707 808_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 144,705,157 | 144,707,808 |
| essv7017354 | Remapped | Perfect | NC_000008.10:g.(?_ 144705157)_(144707 808_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 144,705,157 | 144,707,808 |
| essv7017356 | Remapped | Perfect | NC_000008.10:g.(?_ 144705157)_(144707 808_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 144,705,157 | 144,707,808 |
| essv7017357 | Remapped | Perfect | NC_000008.10:g.(?_ 144705157)_(144707 808_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 144,705,157 | 144,707,808 |
| essv7017358 | Remapped | Perfect | NC_000008.10:g.(?_ 144705157)_(144707 808_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 144,705,157 | 144,707,808 |
| essv7017359 | Remapped | Perfect | NC_000008.10:g.(?_ 144705157)_(144707 808_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 144,705,157 | 144,707,808 |
| essv7017360 | Remapped | Perfect | NC_000008.10:g.(?_ 144705157)_(144707 808_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 144,705,157 | 144,707,808 |
| essv7017361 | Remapped | Perfect | NC_000008.10:g.(?_ 144705157)_(144707 808_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 144,705,157 | 144,707,808 |
| essv7017362 | Remapped | Perfect | NC_000008.10:g.(?_ 144705157)_(144707 808_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 144,705,157 | 144,707,808 |
| essv7017349 | Submitted genomic | NC_000008.9:g.(?_1 44776300)_(1447789 51_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 144,776,300 | 144,778,951 | ||
| essv7017350 | Submitted genomic | NC_000008.9:g.(?_1 44776300)_(1447789 51_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 144,776,300 | 144,778,951 | ||
| essv7017351 | Submitted genomic | NC_000008.9:g.(?_1 44776300)_(1447789 51_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 144,776,300 | 144,778,951 | ||
| essv7017352 | Submitted genomic | NC_000008.9:g.(?_1 44776300)_(1447789 51_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 144,776,300 | 144,778,951 | ||
| essv7017353 | Submitted genomic | NC_000008.9:g.(?_1 44776300)_(1447789 51_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 144,776,300 | 144,778,951 | ||
| essv7017354 | Submitted genomic | NC_000008.9:g.(?_1 44776300)_(1447789 51_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 144,776,300 | 144,778,951 | ||
| essv7017356 | Submitted genomic | NC_000008.9:g.(?_1 44776300)_(1447789 51_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 144,776,300 | 144,778,951 | ||
| essv7017357 | Submitted genomic | NC_000008.9:g.(?_1 44776300)_(1447789 51_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 144,776,300 | 144,778,951 | ||
| essv7017358 | Submitted genomic | NC_000008.9:g.(?_1 44776300)_(1447789 51_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 144,776,300 | 144,778,951 | ||
| essv7017359 | Submitted genomic | NC_000008.9:g.(?_1 44776300)_(1447789 51_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 144,776,300 | 144,778,951 | ||
| essv7017360 | Submitted genomic | NC_000008.9:g.(?_1 44776300)_(1447789 51_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 144,776,300 | 144,778,951 | ||
| essv7017361 | Submitted genomic | NC_000008.9:g.(?_1 44776300)_(1447789 51_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 144,776,300 | 144,778,951 | ||
| essv7017362 | Submitted genomic | NC_000008.9:g.(?_1 44776300)_(1447789 51_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 144,776,300 | 144,778,951 |