Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

esv2761355

Organism: Homo sapiens

Study:estd203 (Vogler et al. 2010)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:59,552

Publication(s):Vogler et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 312 SVs from 50 studies. See in: genome view

Remapped(Score: Perfect):47,757,834-47,817,385

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Outer Stop
esv2761355	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000014.9	Chr14	47,757,834	47,817,385
esv2761355	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000014.8	Chr14	48,227,037	48,286,588
esv2761355	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000014.7	Chr14	47,296,787	47,356,338

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv6998612	copy number loss	SW_0585	SNP array	SNP genotyping analysis	35
essv6998613	copy number loss	SW_0215	SNP array	SNP genotyping analysis	36
essv6998614	copy number loss	SW_1327	SNP array	SNP genotyping analysis	38

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
essv6998612	Remapped	Perfect	NC_000014.9:g.(?_4 7757834)_(47808248 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	47,757,834	47,808,248
essv6998613	Remapped	Perfect	NC_000014.9:g.(?_4 7757834)_(47817385 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	47,757,834	47,817,385
essv6998614	Remapped	Perfect	NC_000014.9:g.(?_4 7762764)_(47808248 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	47,762,764	47,808,248
essv6998612	Remapped	Perfect	NC_000014.8:g.(?_4 8227037)_(48277451 _?)del	GRCh37.p13	First Pass	NC_000014.8	Chr14	48,227,037	48,277,451
essv6998613	Remapped	Perfect	NC_000014.8:g.(?_4 8227037)_(48286588 _?)del	GRCh37.p13	First Pass	NC_000014.8	Chr14	48,227,037	48,286,588
essv6998614	Remapped	Perfect	NC_000014.8:g.(?_4 8231967)_(48277451 _?)del	GRCh37.p13	First Pass	NC_000014.8	Chr14	48,231,967	48,277,451
essv6998612	Submitted genomic		NC_000014.7:g.(?_4 7296787)_(47347201 _?)del	NCBI36 (hg18)		NC_000014.7	Chr14	47,296,787	47,347,201
essv6998613	Submitted genomic		NC_000014.7:g.(?_4 7296787)_(47356338 _?)del	NCBI36 (hg18)		NC_000014.7	Chr14	47,296,787	47,356,338
essv6998614	Submitted genomic		NC_000014.7:g.(?_4 7301717)_(47347201 _?)del	NCBI36 (hg18)		NC_000014.7	Chr14	47,301,717	47,347,201

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI