esv2761392
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:40,943
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 528 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 528 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 251 SVs from 17 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2761392 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 159,227,414 | 159,268,356 |
| esv2761392 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 159,020,104 | 159,061,045 |
| esv2761392 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000007.12 | Chr7 | 158,712,865 | 158,753,806 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv6991981 | copy number gain | SW_1236 | SNP array | SNP genotyping analysis | 23 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv6991981 | Remapped | Good | NC_000007.14:g.(?_ 159227414)_(159268 356_?)dup | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 159,227,414 | 159,268,356 |
| essv6991981 | Remapped | Perfect | NC_000007.13:g.(?_ 159020104)_(159061 045_?)dup | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 159,020,104 | 159,061,045 |
| essv6991981 | Submitted genomic | NC_000007.12:g.(?_ 158712865)_(158753 806_?)dup | NCBI36 (hg18) | NC_000007.12 | Chr7 | 158,712,865 | 158,753,806 |