esv2761440
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:17,534
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 242 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 242 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 70 SVs from 13 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2761440 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 81,784,055 | 81,801,588 |
| esv2761440 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000008.10 | Chr8 | 82,696,290 | 82,713,823 |
| esv2761440 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000008.9 | Chr8 | 82,858,845 | 82,876,378 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv6993213 | copy number loss | SW_1141 | SNP array | SNP genotyping analysis | 17 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv6993213 | Remapped | Perfect | NC_000008.11:g.(?_ 81784055)_(8180158 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 81,784,055 | 81,801,588 |
| essv6993213 | Remapped | Perfect | NC_000008.10:g.(?_ 82696290)_(8271382 3_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 82,696,290 | 82,713,823 |
| essv6993213 | Submitted genomic | NC_000008.9:g.(?_8 2858845)_(82876378 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 82,858,845 | 82,876,378 |