esv2761513
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:27,036
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 344 SVs from 52 studies. See in: genome view
Overlapping variant regions from other studies: 350 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 150 SVs from 19 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2761513 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 28,077,412 | 28,104,447 |
| esv2761513 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 28,077,410 | 28,104,445 |
| esv2761513 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000009.10 | Chr9 | 28,067,410 | 28,094,445 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv6993859 | copy number loss | SW_1236 | SNP array | SNP genotyping analysis | 23 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv6993859 | Remapped | Perfect | NC_000009.12:g.(?_ 28077412)_(2810444 7_?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 28,077,412 | 28,104,447 |
| essv6993859 | Remapped | Perfect | NC_000009.11:g.(?_ 28077410)_(2810444 5_?)del | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 28,077,410 | 28,104,445 |
| essv6993859 | Submitted genomic | NC_000009.10:g.(?_ 28067410)_(2809444 5_?)del | NCBI36 (hg18) | NC_000009.10 | Chr9 | 28,067,410 | 28,094,445 |