esv2761763
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:19,277
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 286 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 286 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 117 SVs from 14 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2761763 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000012.12 | Chr12 | 98,544,934 | 98,564,210 |
| esv2761763 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000012.11 | Chr12 | 98,938,712 | 98,957,988 |
| esv2761763 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000012.10 | Chr12 | 97,462,843 | 97,482,119 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv6997495 | copy number loss | SW_1480 | SNP array | SNP genotyping analysis | 37 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv6997495 | Remapped | Perfect | NC_000012.12:g.(?_ 98544934)_(9856421 0_?)del | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 98,544,934 | 98,564,210 |
| essv6997495 | Remapped | Perfect | NC_000012.11:g.(?_ 98938712)_(9895798 8_?)del | GRCh37.p13 | First Pass | NC_000012.11 | Chr12 | 98,938,712 | 98,957,988 |
| essv6997495 | Submitted genomic | NC_000012.10:g.(?_ 97462843)_(9748211 9_?)del | NCBI36 (hg18) | NC_000012.10 | Chr12 | 97,462,843 | 97,482,119 |