esv2761798
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:58,595
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 493 SVs from 55 studies. See in: genome view
Overlapping variant regions from other studies: 493 SVs from 55 studies. See in: genome view
Overlapping variant regions from other studies: 186 SVs from 19 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2761798 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000013.11 | Chr13 | 66,711,786 | 66,770,380 |
| esv2761798 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000013.10 | Chr13 | 67,285,918 | 67,344,512 |
| esv2761798 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000013.9 | Chr13 | 66,183,919 | 66,242,513 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv6998125 | copy number loss | SW_1367 | SNP array | SNP genotyping analysis | 31 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv6998125 | Remapped | Perfect | NC_000013.11:g.(?_ 66711786)_(6677038 0_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 66,711,786 | 66,770,380 |
| essv6998125 | Remapped | Perfect | NC_000013.10:g.(?_ 67285918)_(6734451 2_?)del | GRCh37.p13 | First Pass | NC_000013.10 | Chr13 | 67,285,918 | 67,344,512 |
| essv6998125 | Submitted genomic | NC_000013.9:g.(?_6 6183919)_(66242513 _?)del | NCBI36 (hg18) | NC_000013.9 | Chr13 | 66,183,919 | 66,242,513 |