esv2761881
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:786
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 144 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 144 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 55 SVs from 7 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2761881 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 86,602,510 | 86,603,295 |
| esv2761881 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 87,145,741 | 87,146,526 |
| esv2761881 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000015.8 | Chr15 | 84,946,745 | 84,947,530 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7000404 | copy number loss | SW_0883 | SNP array | SNP genotyping analysis | 37 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv7000404 | Remapped | Perfect | NC_000015.10:g.(?_ 86602510)_(8660329 5_?)del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 86,602,510 | 86,603,295 |
| essv7000404 | Remapped | Perfect | NC_000015.9:g.(?_8 7145741)_(87146526 _?)del | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 87,145,741 | 87,146,526 |
| essv7000404 | Submitted genomic | NC_000015.8:g.(?_8 4946745)_(84947530 _?)del | NCBI36 (hg18) | NC_000015.8 | Chr15 | 84,946,745 | 84,947,530 |