esv2761883
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:22,711
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 332 SVs from 49 studies. See in: genome view
Overlapping variant regions from other studies: 332 SVs from 49 studies. See in: genome view
Overlapping variant regions from other studies: 147 SVs from 16 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
esv2761883 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 93,598,378 | 93,621,088 |
esv2761883 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 94,141,607 | 94,164,317 |
esv2761883 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000015.8 | Chr15 | 91,942,611 | 91,965,321 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
essv7000418 | copy number loss | SW_1000 | SNP array | SNP genotyping analysis | 42 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
essv7000418 | Remapped | Perfect | NC_000015.10:g.(?_ 93598378)_(9362108 8_?)del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 93,598,378 | 93,621,088 |
essv7000418 | Remapped | Perfect | NC_000015.9:g.(?_9 4141607)_(94164317 _?)del | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 94,141,607 | 94,164,317 |
essv7000418 | Submitted genomic | NC_000015.8:g.(?_9 1942611)_(91965321 _?)del | NCBI36 (hg18) | NC_000015.8 | Chr15 | 91,942,611 | 91,965,321 |