esv2761933
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:53,828
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 331 SVs from 52 studies. See in: genome view
Overlapping variant regions from other studies: 331 SVs from 52 studies. See in: genome view
Overlapping variant regions from other studies: 155 SVs from 16 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2761933 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 86,759,062 | 86,812,889 |
| esv2761933 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000016.9 | Chr16 | 86,792,668 | 86,846,495 |
| esv2761933 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000016.8 | Chr16 | 85,350,169 | 85,403,996 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7001490 | copy number loss | SW_0638 | SNP array | SNP genotyping analysis | 42 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv7001490 | Remapped | Perfect | NC_000016.10:g.(?_ 86759062)_(8681288 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 86,759,062 | 86,812,889 |
| essv7001490 | Remapped | Perfect | NC_000016.9:g.(?_8 6792668)_(86846495 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 86,792,668 | 86,846,495 |
| essv7001490 | Submitted genomic | NC_000016.8:g.(?_8 5350169)_(85403996 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 85,350,169 | 85,403,996 |