esv2762711
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:4,847
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 292 SVs from 43 studies. See in: genome view
Overlapping variant regions from other studies: 292 SVs from 43 studies. See in: genome view
Overlapping variant regions from other studies: 123 SVs from 15 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2762711 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 150,621,713 | 150,626,559 |
| esv2762711 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 150,318,801 | 150,323,647 |
| esv2762711 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000007.12 | Chr7 | 149,949,734 | 149,954,580 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7015532 | copy number loss | RW_0186 | SNP array | SNP genotyping analysis | 74 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv7015532 | Remapped | Perfect | NC_000007.14:g.(?_ 150621713)_(150626 559_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 150,621,713 | 150,626,559 |
| essv7015532 | Remapped | Perfect | NC_000007.13:g.(?_ 150318801)_(150323 647_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 150,318,801 | 150,323,647 |
| essv7015532 | Submitted genomic | NC_000007.12:g.(?_ 149949734)_(149954 580_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 149,949,734 | 149,954,580 |