esv2762845
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:55,698
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 311 SVs from 47 studies. See in: genome view
Overlapping variant regions from other studies: 311 SVs from 47 studies. See in: genome view
Overlapping variant regions from other studies: 91 SVs from 15 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2762845 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 13,087,065 | 13,142,762 |
| esv2762845 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 13,129,065 | 13,184,762 |
| esv2762845 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000010.9 | Chr10 | 13,169,071 | 13,224,768 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7018174 | copy number loss | RW_0260 | SNP array | SNP genotyping analysis | 46 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv7018174 | Remapped | Perfect | NC_000010.11:g.(?_ 13087065)_(1314276 2_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 13,087,065 | 13,142,762 |
| essv7018174 | Remapped | Perfect | NC_000010.10:g.(?_ 13129065)_(1318476 2_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 13,129,065 | 13,184,762 |
| essv7018174 | Submitted genomic | NC_000010.9:g.(?_1 3169071)_(13224768 _?)del | NCBI36 (hg18) | NC_000010.9 | Chr10 | 13,169,071 | 13,224,768 |