esv2762905
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:17,478
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 212 SVs from 49 studies. See in: genome view
Overlapping variant regions from other studies: 212 SVs from 49 studies. See in: genome view
Overlapping variant regions from other studies: 53 SVs from 14 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2762905 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 34,217,106 | 34,234,583 |
| esv2762905 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 34,238,653 | 34,256,130 |
| esv2762905 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 34,195,229 | 34,212,706 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7019751 | copy number loss | RW_0653 | SNP array | SNP genotyping analysis | 55 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv7019751 | Remapped | Perfect | NC_000011.10:g.(?_ 34217106)_(3423458 3_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 34,217,106 | 34,234,583 |
| essv7019751 | Remapped | Perfect | NC_000011.9:g.(?_3 4238653)_(34256130 _?)del | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 34,238,653 | 34,256,130 |
| essv7019751 | Submitted genomic | NC_000011.8:g.(?_3 4195229)_(34212706 _?)del | NCBI36 (hg18) | NC_000011.8 | Chr11 | 34,195,229 | 34,212,706 |