esv2763145
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:6,135
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 200 SVs from 37 studies. See in: genome view
Overlapping variant regions from other studies: 200 SVs from 37 studies. See in: genome view
Overlapping variant regions from other studies: 92 SVs from 13 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2763145 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 79,555,930 | 79,562,064 |
| esv2763145 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000016.9 | Chr16 | 79,589,827 | 79,595,961 |
| esv2763145 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000016.8 | Chr16 | 78,147,328 | 78,153,462 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7024014 | copy number loss | RW_0538 | SNP array | SNP genotyping analysis | 48 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv7024014 | Remapped | Perfect | NC_000016.10:g.(?_ 79555930)_(7956206 4_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 79,555,930 | 79,562,064 |
| essv7024014 | Remapped | Perfect | NC_000016.9:g.(?_7 9589827)_(79595961 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 79,589,827 | 79,595,961 |
| essv7024014 | Submitted genomic | NC_000016.8:g.(?_7 8147328)_(78153462 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 78,147,328 | 78,153,462 |