esv2763393
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:64,071
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 326 SVs from 45 studies. See in: genome view
Overlapping variant regions from other studies: 326 SVs from 45 studies. See in: genome view
Overlapping variant regions from other studies: 115 SVs from 17 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2763393 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 135,112,677 | 135,176,747 |
| esv2763393 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 136,033,832 | 136,097,902 |
| esv2763393 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000004.10 | Chr4 | 136,253,282 | 136,317,352 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7030088 | copy number loss | SW_0570 | SNP array | SNP genotyping analysis | 39 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv7030088 | Remapped | Perfect | NC_000004.12:g.(?_ 135112677)_(135176 747_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 135,112,677 | 135,176,747 |
| essv7030088 | Remapped | Perfect | NC_000004.11:g.(?_ 136033832)_(136097 902_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 136,033,832 | 136,097,902 |
| essv7030088 | Submitted genomic | NC_000004.10:g.(?_ 136253282)_(136317 352_?)del | NCBI36 (hg18) | NC_000004.10 | Chr4 | 136,253,282 | 136,317,352 |