esv2763423
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:46,187
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 536 SVs from 62 studies. See in: genome view
Overlapping variant regions from other studies: 536 SVs from 62 studies. See in: genome view
Overlapping variant regions from other studies: 241 SVs from 16 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
esv2763423 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 184,642,465 | 184,688,651 |
esv2763423 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 185,563,619 | 185,609,805 |
esv2763423 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000004.10 | Chr4 | 185,800,613 | 185,846,799 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
essv7030380 | copy number loss | SW_0379 | SNP array | SNP genotyping analysis | 43 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
essv7030380 | Remapped | Perfect | NC_000004.12:g.(?_ 184642465)_(184688 651_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 184,642,465 | 184,688,651 |
essv7030380 | Remapped | Perfect | NC_000004.11:g.(?_ 185563619)_(185609 805_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 185,563,619 | 185,609,805 |
essv7030380 | Submitted genomic | NC_000004.10:g.(?_ 185800613)_(185846 799_?)del | NCBI36 (hg18) | NC_000004.10 | Chr4 | 185,800,613 | 185,846,799 |