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esv2763916

  • Variant Calls:2
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:1,246

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 169 SVs from 37 studies. See in: genome view    
Remapped(Score: Perfect):29,077,282-29,078,527Question Mark
Overlapping variant regions from other studies: 45 SVs from 21 studies. See in: genome view    
Remapped(Score: Good):49,674-50,915Question Mark
Overlapping variant regions from other studies: 169 SVs from 37 studies. See in: genome view    
Remapped(Score: Perfect):29,077,389-29,078,634Question Mark
Overlapping variant regions from other studies: 30 SVs from 12 studies. See in: genome view    
Remapped(Score: Good):49,674-50,915Question Mark
Overlapping variant regions from other studies: 72 SVs from 15 studies. See in: genome view    
Submitted genomic29,113,146-29,114,391Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrInner StartOuter Stop
esv2763916RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000005.10Chr529,077,28229,078,527
esv2763916RemappedGoodGRCh38.p12ALT_REF_LOCI_1Second PassNW_003571036.1Chr5|NW_00
3571036.1		49,67450,915
esv2763916RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000005.9Chr529,077,38929,078,634
esv2763916RemappedGoodGRCh37.p13PATCHESSecond PassNW_003571036.1Chr5|NW_00
3571036.1		49,67450,915
esv2763916Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000005.8Chr529,113,14629,114,391

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
essv7030996copy number lossSW_1284SNP arraySNP genotyping analysis31
essv7030997copy number lossSW_0379SNP arraySNP genotyping analysis43

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrInner StartInner Stop
essv7030996RemappedGoodNW_003571036.1:g.(
?_49674)_(50915_?)
del		GRCh38.p12Second PassNW_003571036.1Chr5|NW_00
3571036.1		49,67450,915
essv7030997RemappedGoodNW_003571036.1:g.(
?_49770)_(50915_?)
del		GRCh38.p12Second PassNW_003571036.1Chr5|NW_00
3571036.1		49,77050,915
essv7030996RemappedPerfectNC_000005.10:g.(?_
29077282)_(2907852
7_?)del		GRCh38.p12First PassNC_000005.10Chr529,077,28229,078,527
essv7030997RemappedPerfectNC_000005.10:g.(?_
29077378)_(2907852
7_?)del		GRCh38.p12First PassNC_000005.10Chr529,077,37829,078,527
essv7030996RemappedGoodNW_003571036.1:g.(
?_49674)_(50915_?)
del		GRCh37.p13Second PassNW_003571036.1Chr5|NW_00
3571036.1		49,67450,915
essv7030997RemappedGoodNW_003571036.1:g.(
?_49770)_(50915_?)
del		GRCh37.p13Second PassNW_003571036.1Chr5|NW_00
3571036.1		49,77050,915
essv7030996RemappedPerfectNC_000005.9:g.(?_2
9077389)_(29078634
_?)del		GRCh37.p13First PassNC_000005.9Chr529,077,38929,078,634
essv7030997RemappedPerfectNC_000005.9:g.(?_2
9077485)_(29078634
_?)del		GRCh37.p13First PassNC_000005.9Chr529,077,48529,078,634
essv7030996Submitted genomicNC_000005.8:g.(?_2
9113146)_(29114391
_?)del		NCBI36 (hg18)NC_000005.8Chr529,113,14629,114,391
essv7030997Submitted genomicNC_000005.8:g.(?_2
9113242)_(29114391
_?)del		NCBI36 (hg18)NC_000005.8Chr529,113,24229,114,391

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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