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dbVar

Database of genomic structural variation

esv2763933

Organism: Homo sapiens

Study:estd203 (Vogler et al. 2010)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:68,141

Publication(s):Vogler et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 317 SVs from 55 studies. See in: genome view

Remapped(Score: Perfect):102,127,485-102,195,625

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Outer Stop
esv2763933	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	102,127,485	102,195,625
esv2763933	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	101,463,189	101,531,329
esv2763933	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000005.8	Chr5	101,491,088	101,559,228

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv7031321	copy number gain	SW_1306	SNP array	SNP genotyping analysis	25
essv7031322	copy number loss	SW_1292	SNP array	SNP genotyping analysis	25

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
essv7031321	Remapped	Perfect	NC_000005.10:g.(?_ 102127485)_(102195 625_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	102,127,485	102,195,625
essv7031322	Remapped	Perfect	NC_000005.10:g.(?_ 102137483)_(102186 533_?)del	GRCh38.p12	First Pass	NC_000005.10	Chr5	102,137,483	102,186,533
essv7031321	Remapped	Perfect	NC_000005.9:g.(?_1 01463189)_(1015313 29_?)dup	GRCh37.p13	First Pass	NC_000005.9	Chr5	101,463,189	101,531,329
essv7031322	Remapped	Perfect	NC_000005.9:g.(?_1 01473187)_(1015222 37_?)del	GRCh37.p13	First Pass	NC_000005.9	Chr5	101,473,187	101,522,237
essv7031321	Submitted genomic		NC_000005.8:g.(?_1 01491088)_(1015592 28_?)dup	NCBI36 (hg18)		NC_000005.8	Chr5	101,491,088	101,559,228
essv7031322	Submitted genomic		NC_000005.8:g.(?_1 01501086)_(1015501 36_?)del	NCBI36 (hg18)		NC_000005.8	Chr5	101,501,086	101,550,136

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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