Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

esv2763991

Organism: Homo sapiens

Study:estd203 (Vogler et al. 2010)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:20,589

Publication(s):Vogler et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 289 SVs from 52 studies. See in: genome view

Remapped(Score: Perfect):82,650,973-82,671,561

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Outer Stop
esv2763991	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	82,650,973	82,671,561
esv2763991	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000010.10	Chr10	84,410,729	84,431,317
esv2763991	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000010.9	Chr10	84,400,709	84,421,297

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv6995139	copy number gain	SW_0059	SNP array	SNP genotyping analysis	36
essv6995140	copy number gain	SW_1020	SNP array	SNP genotyping analysis	32
essv6995141	copy number gain	SW_0241	SNP array	SNP genotyping analysis	45

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
essv6995139	Remapped	Perfect	NC_000010.11:g.(?_ 82650973)_(8267156 1_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	82,650,973	82,671,561
essv6995140	Remapped	Perfect	NC_000010.11:g.(?_ 82650973)_(8267156 1_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	82,650,973	82,671,561
essv6995141	Remapped	Perfect	NC_000010.11:g.(?_ 82652146)_(8267156 1_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	82,652,146	82,671,561
essv6995139	Remapped	Perfect	NC_000010.10:g.(?_ 84410729)_(8443131 7_?)dup	GRCh37.p13	First Pass	NC_000010.10	Chr10	84,410,729	84,431,317
essv6995140	Remapped	Perfect	NC_000010.10:g.(?_ 84410729)_(8443131 7_?)dup	GRCh37.p13	First Pass	NC_000010.10	Chr10	84,410,729	84,431,317
essv6995141	Remapped	Perfect	NC_000010.10:g.(?_ 84411902)_(8443131 7_?)dup	GRCh37.p13	First Pass	NC_000010.10	Chr10	84,411,902	84,431,317
essv6995139	Submitted genomic		NC_000010.9:g.(?_8 4400709)_(84421297 _?)dup	NCBI36 (hg18)		NC_000010.9	Chr10	84,400,709	84,421,297
essv6995140	Submitted genomic		NC_000010.9:g.(?_8 4400709)_(84421297 _?)dup	NCBI36 (hg18)		NC_000010.9	Chr10	84,400,709	84,421,297
essv6995141	Submitted genomic		NC_000010.9:g.(?_8 4401882)_(84421297 _?)dup	NCBI36 (hg18)		NC_000010.9	Chr10	84,401,882	84,421,297

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI