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dbVar

Database of genomic structural variation

esv2764025

Organism: Homo sapiens

Study:estd203 (Vogler et al. 2010)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:176,540

Publication(s):Vogler et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 554 SVs from 66 studies. See in: genome view

Remapped(Score: Perfect):134,799,276-134,975,815

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Outer Stop
esv2764025	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	134,799,276	134,975,815
esv2764025	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000007.13	Chr7	134,484,027	134,660,566
esv2764025	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000007.12	Chr7	134,134,567	134,311,106

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv6991366	copy number loss	SW_0176	SNP array	SNP genotyping analysis	26
essv6991368	copy number loss	SW_1480	SNP array	SNP genotyping analysis	37

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
essv6991366	Remapped	Perfect	NC_000007.14:g.(?_ 134799276)_(134975 815_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	134,799,276	134,975,815
essv6991368	Remapped	Perfect	NC_000007.14:g.(?_ 134810619)_(134814 233_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	134,810,619	134,814,233
essv6991366	Remapped	Perfect	NC_000007.13:g.(?_ 134484027)_(134660 566_?)del	GRCh37.p13	First Pass	NC_000007.13	Chr7	134,484,027	134,660,566
essv6991368	Remapped	Perfect	NC_000007.13:g.(?_ 134495370)_(134498 984_?)del	GRCh37.p13	First Pass	NC_000007.13	Chr7	134,495,370	134,498,984
essv6991366	Submitted genomic		NC_000007.12:g.(?_ 134134567)_(134311 106_?)del	NCBI36 (hg18)		NC_000007.12	Chr7	134,134,567	134,311,106
essv6991368	Submitted genomic		NC_000007.12:g.(?_ 134145910)_(134149 524_?)del	NCBI36 (hg18)		NC_000007.12	Chr7	134,145,910	134,149,524

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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