esv2764116
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:26
- Validation:Not tested
- Clinical Assertions: No
- Region Size:13,660
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 547 SVs from 87 studies. See in: genome view
Overlapping variant regions from other studies: 547 SVs from 87 studies. See in: genome view
Overlapping variant regions from other studies: 238 SVs from 26 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2764116 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 15,542,279 | 15,555,938 |
| esv2764116 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000008.10 | Chr8 | 15,399,788 | 15,413,447 |
| esv2764116 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000008.9 | Chr8 | 15,444,159 | 15,457,818 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv6992716 | copy number loss | SW_1027 | SNP array | SNP genotyping analysis | 33 |
| essv6992717 | copy number loss | SW_1179 | SNP array | SNP genotyping analysis | 26 |
| essv6992718 | copy number loss | SW_1447 | SNP array | SNP genotyping analysis | 35 |
| essv6992719 | copy number loss | SW_1365 | SNP array | SNP genotyping analysis | 36 |
| essv6992720 | copy number loss | SW_0021 | SNP array | SNP genotyping analysis | 39 |
| essv6992721 | copy number loss | SW_0033 | SNP array | SNP genotyping analysis | 39 |
| essv6992723 | copy number loss | SW_0085 | SNP array | SNP genotyping analysis | 42 |
| essv6992724 | copy number loss | SW_0086 | SNP array | SNP genotyping analysis | 50 |
| essv6992725 | copy number loss | SW_0183 | SNP array | SNP genotyping analysis | 45 |
| essv6992726 | copy number loss | SW_0191 | SNP array | SNP genotyping analysis | 36 |
| essv6992727 | copy number loss | SW_0241 | SNP array | SNP genotyping analysis | 45 |
| essv6992728 | copy number loss | SW_0341 | SNP array | SNP genotyping analysis | 25 |
| essv6992729 | copy number loss | SW_0552 | SNP array | SNP genotyping analysis | 42 |
| essv6992730 | copy number loss | SW_0653 | SNP array | SNP genotyping analysis | 37 |
| essv6992731 | copy number loss | SW_0659 | SNP array | SNP genotyping analysis | 35 |
| essv6992732 | copy number loss | SW_0759 | SNP array | SNP genotyping analysis | 44 |
| essv6992734 | copy number loss | SW_0815 | SNP array | SNP genotyping analysis | 46 |
| essv6992735 | copy number loss | SW_1103 | SNP array | SNP genotyping analysis | 43 |
| essv6992736 | copy number loss | SW_1116 | SNP array | SNP genotyping analysis | 50 |
| essv6992737 | copy number loss | SW_1209 | SNP array | SNP genotyping analysis | 45 |
| essv6992738 | copy number loss | SW_1323 | SNP array | SNP genotyping analysis | 29 |
| essv6992739 | copy number loss | SW_1346 | SNP array | SNP genotyping analysis | 42 |
| essv6992740 | copy number loss | SW_1409 | SNP array | SNP genotyping analysis | 40 |
| essv6992741 | copy number loss | SW_1451 | SNP array | SNP genotyping analysis | 26 |
| essv6992742 | copy number loss | SW_1527 | SNP array | SNP genotyping analysis | 33 |
| essv6992743 | copy number loss | SW_1551 | SNP array | SNP genotyping analysis | 22 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv6992716 | Remapped | Perfect | NC_000008.11:g.(?_ 15542279)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,542,279 | 15,555,938 |
| essv6992717 | Remapped | Perfect | NC_000008.11:g.(?_ 15542279)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,542,279 | 15,555,938 |
| essv6992718 | Remapped | Perfect | NC_000008.11:g.(?_ 15542279)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,542,279 | 15,555,938 |
| essv6992719 | Remapped | Perfect | NC_000008.11:g.(?_ 15543669)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,543,669 | 15,555,938 |
| essv6992720 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992721 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992723 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992724 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992725 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992726 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992727 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992728 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992729 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992730 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992731 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992732 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992734 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992735 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992736 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992737 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992738 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992739 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992740 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992741 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992742 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992743 | Remapped | Perfect | NC_000008.11:g.(?_ 15545551)_(1555593 8_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 15,545,551 | 15,555,938 |
| essv6992716 | Remapped | Perfect | NC_000008.10:g.(?_ 15399788)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,399,788 | 15,413,447 |
| essv6992717 | Remapped | Perfect | NC_000008.10:g.(?_ 15399788)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,399,788 | 15,413,447 |
| essv6992718 | Remapped | Perfect | NC_000008.10:g.(?_ 15399788)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,399,788 | 15,413,447 |
| essv6992719 | Remapped | Perfect | NC_000008.10:g.(?_ 15401178)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,401,178 | 15,413,447 |
| essv6992720 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992721 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992723 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992724 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992725 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992726 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992727 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992728 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992729 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992730 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992731 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992732 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992734 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992735 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992736 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992737 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992738 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992739 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992740 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992741 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992742 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992743 | Remapped | Perfect | NC_000008.10:g.(?_ 15403060)_(1541344 7_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 15,403,060 | 15,413,447 |
| essv6992716 | Submitted genomic | NC_000008.9:g.(?_1 5444159)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,444,159 | 15,457,818 | ||
| essv6992717 | Submitted genomic | NC_000008.9:g.(?_1 5444159)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,444,159 | 15,457,818 | ||
| essv6992718 | Submitted genomic | NC_000008.9:g.(?_1 5444159)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,444,159 | 15,457,818 | ||
| essv6992719 | Submitted genomic | NC_000008.9:g.(?_1 5445549)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,445,549 | 15,457,818 | ||
| essv6992720 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992721 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992723 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992724 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992725 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992726 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992727 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992728 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992729 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992730 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992731 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992732 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992734 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992735 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992736 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992737 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992738 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992739 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992740 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992741 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992742 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 | ||
| essv6992743 | Submitted genomic | NC_000008.9:g.(?_1 5447431)_(15457818 _?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 15,447,431 | 15,457,818 |