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dbVar

Database of genomic structural variation

esv2764198

Organism: Homo sapiens

Study:estd203 (Vogler et al. 2010)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:8,708

Publication(s):Vogler et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 192 SVs from 38 studies. See in: genome view

Remapped(Score: Perfect):184,992,672-185,001,379

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Outer Stop
esv2764198	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	184,992,672	185,001,379
esv2764198	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	184,961,804	184,970,511
esv2764198	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000001.9	Chr1	183,228,427	183,237,134

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv7006726	copy number loss	RW_0129	SNP array	SNP genotyping analysis	68
essv7006727	copy number loss	RW_0186	SNP array	SNP genotyping analysis	74

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
essv7006726	Remapped	Perfect	NC_000001.11:g.(?_ 184992672)_(185001 379_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	184,992,672	185,001,379
essv7006727	Remapped	Perfect	NC_000001.11:g.(?_ 184992672)_(185001 379_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	184,992,672	185,001,379
essv7006726	Remapped	Perfect	NC_000001.10:g.(?_ 184961804)_(184970 511_?)del	GRCh37.p13	First Pass	NC_000001.10	Chr1	184,961,804	184,970,511
essv7006727	Remapped	Perfect	NC_000001.10:g.(?_ 184961804)_(184970 511_?)del	GRCh37.p13	First Pass	NC_000001.10	Chr1	184,961,804	184,970,511
essv7006726	Submitted genomic		NC_000001.9:g.(?_1 83228427)_(1832371 34_?)del	NCBI36 (hg18)		NC_000001.9	Chr1	183,228,427	183,237,134
essv7006727	Submitted genomic		NC_000001.9:g.(?_1 83228427)_(1832371 34_?)del	NCBI36 (hg18)		NC_000001.9	Chr1	183,228,427	183,237,134

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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