esv2861
- Organism: Homo sapiens
- Study:estd3 (Wang et al. 2008)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:9,213
- Publication(s):Wang et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 626 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 626 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 328 SVs from 26 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
esv2861 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000018.10 | Chr18 | 69,541,077 | 69,550,289 |
esv2861 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000018.9 | Chr18 | 67,208,313 | 67,217,525 |
esv2861 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000018.8 | Chr18 | 65,359,293 | 65,368,505 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
essv25302 | copy number loss | YH | Sequencing | Read depth and paired-end mapping | 2,682 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
essv25302 | Remapped | Perfect | NC_000018.10:g.(69 541077_?)_(?_69550 289)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 69,541,077 | 69,550,289 |
essv25302 | Remapped | Perfect | NC_000018.9:g.(672 08313_?)_(?_672175 25)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 67,208,313 | 67,217,525 |
essv25302 | Submitted genomic | NC_000018.8:g.(653 59293_?)_(?_653685 05)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 65,359,293 | 65,368,505 |