esv3269
- Organism: Homo sapiens
- Study:estd3 (Wang et al. 2008)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:525
- Publication(s):Wang et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 338 SVs from 42 studies. See in: genome view
Overlapping variant regions from other studies: 338 SVs from 42 studies. See in: genome view
Overlapping variant regions from other studies: 153 SVs from 12 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3269 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 5,290,779 | 5,291,303 |
| esv3269 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 5,292,506 | 5,293,030 |
| esv3269 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000004.10 | Chr4 | 5,343,407 | 5,343,931 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv25710 | inversion | YH | Sequencing | Read depth and paired-end mapping | 2,682 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv25710 | Remapped | Perfect | NC_000004.12:g.(52 90779_?)_(?_529130 3)inv | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 5,290,779 | 5,291,303 |
| essv25710 | Remapped | Perfect | NC_000004.11:g.(52 92506_?)_(?_529303 0)inv | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 5,292,506 | 5,293,030 |
| essv25710 | Submitted genomic | NC_000004.10:g.(53 43407_?)_(?_534393 1)inv | NCBI36 (hg18) | NC_000004.10 | Chr4 | 5,343,407 | 5,343,931 |