esv3300
- Organism: Homo sapiens
- Study:estd3 (Wang et al. 2008)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,217
- Publication(s):Wang et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 173 SVs from 38 studies. See in: genome view
Overlapping variant regions from other studies: 173 SVs from 38 studies. See in: genome view
Overlapping variant regions from other studies: 42 SVs from 13 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3300 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 197,787,658 | 197,788,874 |
| esv3300 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 197,756,788 | 197,758,004 |
| esv3300 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000001.9 | Chr1 | 196,023,411 | 196,024,627 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv25741 | inversion | YH | Sequencing | Read depth and paired-end mapping | 2,682 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv25741 | Remapped | Perfect | NC_000001.11:g.(19 7787658_?)_(?_1977 88874)inv | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 197,787,658 | 197,788,874 |
| essv25741 | Remapped | Perfect | NC_000001.10:g.(19 7756788_?)_(?_1977 58004)inv | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 197,756,788 | 197,758,004 |
| essv25741 | Submitted genomic | NC_000001.9:g.(196 023411_?)_(?_19602 4627)inv | NCBI36 (hg18) | NC_000001.9 | Chr1 | 196,023,411 | 196,024,627 |