esv3310373
- Organism: Homo sapiens
- Study:estd59 (1000 Genomes Consortium Pilot Project)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):1000 Genomes Project Consortium et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 150 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 150 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 29 SVs from 9 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3310373 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 43,852,946 (-41, +41) | 43,852,946 (-41, +41) |
| esv3310373 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000002.11 | Chr2 | 44,080,085 (-41, +41) | 44,080,085 (-41, +41) |
| esv3310373 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000002.10 | Chr2 | 43,933,589 (-41, +41) | 43,933,589 (-41, +41) |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7837882 | mobile element insertion | SAMN00801914 | Sequencing | Paired-end mapping | 26,039 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv7837882 | Remapped | Perfect | NC_000002.12:g.(43 852905_43852987)_( 43852905_43852987) ins253 | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 43,852,946 (-41, +41) | 43,852,946 (-41, +41) |
| essv7837882 | Remapped | Perfect | NC_000002.11:g.(44 080044_44080126)_( 44080044_44080126) ins253 | GRCh37.p13 | First Pass | NC_000002.11 | Chr2 | 44,080,085 (-41, +41) | 44,080,085 (-41, +41) |
| essv7837882 | Submitted genomic | NC_000002.10:g.(43 933548_43933630)_( 43933548_43933630) ins253 | NCBI36 (hg18) | NC_000002.10 | Chr2 | 43,933,589 (-41, +41) | 43,933,589 (-41, +41) |