Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

esv3310383

Organism: Homo sapiens

Study:estd59 (1000 Genomes Consortium Pilot Project)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):1000 Genomes Project Consortium et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 122 SVs from 31 studies. See in: genome view

Remapped(Score: Perfect):72,849,132-72,849,168

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv3310383	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	72,849,150 (-18, +18)	72,849,150 (-18, +18)
esv3310383	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000008.10	Chr8	73,761,385 (-18, +18)	73,761,385 (-18, +18)
esv3310383	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000008.9	Chr8	73,923,939 (-18, +18)	73,923,939 (-18, +18)

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv7840273	mobile element insertion	SAMN00801888	Sequencing	Split read and paired-end mapping	69,298
essv7840862	mobile element insertion	SAMN00801912	Sequencing	Split read and paired-end mapping	25,841
essv7841234	mobile element insertion	SAMN00801914	Sequencing	Split read and paired-end mapping	26,039
essv7842877	mobile element insertion	SAMN00001695	Sequencing	Split read and paired-end mapping	37,049

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv7840273	Remapped	Perfect	NC_000008.11:g.(72 849132_72849168)_( 72849132_72849168) ins304	GRCh38.p12	First Pass	NC_000008.11	Chr8	72,849,150 (-18, +18)	72,849,150 (-18, +18)
essv7840862	Remapped	Perfect	NC_000008.11:g.(72 849132_72849168)_( 72849132_72849168) ins304	GRCh38.p12	First Pass	NC_000008.11	Chr8	72,849,150 (-18, +18)	72,849,150 (-18, +18)
essv7841234	Remapped	Perfect	NC_000008.11:g.(72 849132_72849168)_( 72849132_72849168) ins304	GRCh38.p12	First Pass	NC_000008.11	Chr8	72,849,150 (-18, +18)	72,849,150 (-18, +18)
essv7842877	Remapped	Perfect	NC_000008.11:g.(72 849132_72849168)_( 72849132_72849168) ins304	GRCh38.p12	First Pass	NC_000008.11	Chr8	72,849,150 (-18, +18)	72,849,150 (-18, +18)
essv7840273	Remapped	Perfect	NC_000008.10:g.(73 761367_73761403)_( 73761367_73761403) ins304	GRCh37.p13	First Pass	NC_000008.10	Chr8	73,761,385 (-18, +18)	73,761,385 (-18, +18)
essv7840862	Remapped	Perfect	NC_000008.10:g.(73 761367_73761403)_( 73761367_73761403) ins304	GRCh37.p13	First Pass	NC_000008.10	Chr8	73,761,385 (-18, +18)	73,761,385 (-18, +18)
essv7841234	Remapped	Perfect	NC_000008.10:g.(73 761367_73761403)_( 73761367_73761403) ins304	GRCh37.p13	First Pass	NC_000008.10	Chr8	73,761,385 (-18, +18)	73,761,385 (-18, +18)
essv7842877	Remapped	Perfect	NC_000008.10:g.(73 761367_73761403)_( 73761367_73761403) ins304	GRCh37.p13	First Pass	NC_000008.10	Chr8	73,761,385 (-18, +18)	73,761,385 (-18, +18)
essv7840273	Submitted genomic		NC_000008.9:g.(739 23921_73923957)_(7 3923921_73923957)i ns304	NCBI36 (hg18)		NC_000008.9	Chr8	73,923,939 (-18, +18)	73,923,939 (-18, +18)
essv7840862	Submitted genomic		NC_000008.9:g.(739 23921_73923957)_(7 3923921_73923957)i ns304	NCBI36 (hg18)		NC_000008.9	Chr8	73,923,939 (-18, +18)	73,923,939 (-18, +18)
essv7841234	Submitted genomic		NC_000008.9:g.(739 23921_73923957)_(7 3923921_73923957)i ns304	NCBI36 (hg18)		NC_000008.9	Chr8	73,923,939 (-18, +18)	73,923,939 (-18, +18)
essv7842877	Submitted genomic		NC_000008.9:g.(739 23921_73923957)_(7 3923921_73923957)i ns304	NCBI36 (hg18)		NC_000008.9	Chr8	73,923,939 (-18, +18)	73,923,939 (-18, +18)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI