esv3310405
- Organism: Homo sapiens
- Study:estd59 (1000 Genomes Consortium Pilot Project)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):1000 Genomes Project Consortium et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 102 SVs from 34 studies. See in: genome view
Overlapping variant regions from other studies: 102 SVs from 34 studies. See in: genome view
Overlapping variant regions from other studies: 39 SVs from 10 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3310405 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 94,625,116 (-23, +23) | 94,625,116 (-23, +23) |
| esv3310405 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 97,387,398 (-23, +23) | 97,387,398 (-23, +23) |
| esv3310405 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000009.10 | Chr9 | 96,427,219 (-23, +23) | 96,427,219 (-23, +23) |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv7839072 | mobile element insertion | Sequencing | Split read mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv7839072 | Remapped | Perfect | NC_000009.12:g.(94 625093_94625139)_( 94625093_94625139) ins296 | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 94,625,116 (-23, +23) | 94,625,116 (-23, +23) |
| essv7839072 | Remapped | Perfect | NC_000009.11:g.(97 387375_97387421)_( 97387375_97387421) ins296 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 97,387,398 (-23, +23) | 97,387,398 (-23, +23) |
| essv7839072 | Submitted genomic | NC_000009.10:g.(96 427196_96427242)_( 96427196_96427242) ins296 | NCBI36 (hg18) | NC_000009.10 | Chr9 | 96,427,219 (-23, +23) | 96,427,219 (-23, +23) |