esv3310464
- Organism: Homo sapiens
- Study:estd59 (1000 Genomes Consortium Pilot Project)
- Variant Type:novel sequence insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,768
- Publication(s):1000 Genomes Project Consortium et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 103 SVs from 27 studies. See in: genome view
Overlapping variant regions from other studies: 103 SVs from 27 studies. See in: genome view
Overlapping variant regions from other studies: 35 SVs from 10 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
esv3310464 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 88,625,323 | 88,627,090 | 88,625,323 | 88,627,090 |
esv3310464 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 91,240,238 | 91,242,005 | 91,240,238 | 91,242,005 |
esv3310464 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000009.10 | Chr9 | 90,430,058 | 90,431,825 | 90,430,058 | 90,431,825 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
essv7843518 | novel sequence insertion | SAMN00001696 | Sequencing | Paired-end mapping | 44,056 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
essv7843518 | Remapped | Perfect | NC_000009.12:g.(88 625323_88627090)_( 88625323_88627090) ins1066 | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 88,625,323 | 88,627,090 | 88,625,323 | 88,627,090 |
essv7843518 | Remapped | Perfect | NC_000009.11:g.(91 240238_91242005)_( 91240238_91242005) ins1066 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 91,240,238 | 91,242,005 | 91,240,238 | 91,242,005 |
essv7843518 | Submitted genomic | NC_000009.10:g.(90 430058_90431825)_( 90430058_90431825) ins1066 | NCBI36 (hg18) | NC_000009.10 | Chr9 | 90,430,058 | 90,431,825 | 90,430,058 | 90,431,825 |