esv3310499
- Organism: Homo sapiens
- Study:estd59 (1000 Genomes Consortium Pilot Project)
- Variant Type:novel sequence insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:618
- Publication(s):1000 Genomes Project Consortium et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 532 SVs from 63 studies. See in: genome view
Overlapping variant regions from other studies: 497 SVs from 61 studies. See in: genome view
Overlapping variant regions from other studies: 270 SVs from 17 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
esv3310499 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 19,919,091 | 19,919,708 | 19,919,091 | 19,919,708 |
esv3310499 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000022.10 | Chr22 | 19,906,614 | 19,907,231 | 19,906,614 | 19,907,231 |
esv3310499 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000022.9 | Chr22 | 18,286,614 | 18,287,231 | 18,286,614 | 18,287,231 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
essv7843512 | novel sequence insertion | SAMN00001696 | Sequencing | Paired-end mapping | 44,056 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
essv7843512 | Remapped | Perfect | NC_000022.11:g.(19 919091_19919708)_( 19919091_19919708) ins655 | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 19,919,091 | 19,919,708 | 19,919,091 | 19,919,708 |
essv7843512 | Remapped | Perfect | NC_000022.10:g.(19 906614_19907231)_( 19906614_19907231) ins655 | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 19,906,614 | 19,907,231 | 19,906,614 | 19,907,231 |
essv7843512 | Submitted genomic | NC_000022.9:g.(182 86614_18287231)_(1 8286614_18287231)i ns655 | NCBI36 (hg18) | NC_000022.9 | Chr22 | 18,286,614 | 18,287,231 | 18,286,614 | 18,287,231 |