esv3310528
- Organism: Homo sapiens
- Study:estd59 (1000 Genomes Consortium Pilot Project)
- Variant Type:novel sequence insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,557
- Publication(s):1000 Genomes Project Consortium et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 108 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 108 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 24 SVs from 9 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv3310528 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 168,000,110 | 168,001,666 | 168,000,110 | 168,001,666 |
| esv3310528 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 167,717,898 | 167,719,454 | 167,717,898 | 167,719,454 |
| esv3310528 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000003.10 | Chr3 | 169,200,592 | 169,202,148 | 169,200,592 | 169,202,148 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7843506 | novel sequence insertion | SAMN00001696 | Sequencing | Paired-end mapping | 44,056 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv7843506 | Remapped | Perfect | NC_000003.12:g.(16 8000110_168001666) _(168000110_168001 666)ins1187 | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 168,000,110 | 168,001,666 | 168,000,110 | 168,001,666 |
| essv7843506 | Remapped | Perfect | NC_000003.11:g.(16 7717898_167719454) _(167717898_167719 454)ins1187 | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 167,717,898 | 167,719,454 | 167,717,898 | 167,719,454 |
| essv7843506 | Submitted genomic | NC_000003.10:g.(16 9200592_169202148) _(169200592_169202 148)ins1187 | NCBI36 (hg18) | NC_000003.10 | Chr3 | 169,200,592 | 169,202,148 | 169,200,592 | 169,202,148 |