esv3310541
- Organism: Homo sapiens
- Study:estd59 (1000 Genomes Consortium Pilot Project)
- Variant Type:novel sequence insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,306
- Publication(s):1000 Genomes Project Consortium et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 334 SVs from 57 studies. See in: genome view
Overlapping variant regions from other studies: 334 SVs from 57 studies. See in: genome view
Overlapping variant regions from other studies: 168 SVs from 18 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv3310541 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 19,013,007 | 19,014,312 | 19,013,007 | 19,014,312 |
| esv3310541 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000017.10 | Chr17 | 18,916,320 | 18,917,625 | 18,916,320 | 18,917,625 |
| esv3310541 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000017.9 | Chr17 | 18,857,045 | 18,858,350 | 18,857,045 | 18,858,350 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7843500 | novel sequence insertion | SAMN00001696 | Sequencing | Paired-end mapping | 44,056 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv7843500 | Remapped | Perfect | NC_000017.11:g.(19 013007_19014312)_( 19013007_19014312) ins1382 | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 19,013,007 | 19,014,312 | 19,013,007 | 19,014,312 |
| essv7843500 | Remapped | Perfect | NC_000017.10:g.(18 916320_18917625)_( 18916320_18917625) ins1382 | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 18,916,320 | 18,917,625 | 18,916,320 | 18,917,625 |
| essv7843500 | Submitted genomic | NC_000017.9:g.(188 57045_18858350)_(1 8857045_18858350)i ns1382 | NCBI36 (hg18) | NC_000017.9 | Chr17 | 18,857,045 | 18,858,350 | 18,857,045 | 18,858,350 |