esv3310549
- Organism: Homo sapiens
- Study:estd59 (1000 Genomes Consortium Pilot Project)
- Variant Type:novel sequence insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,569
- Publication(s):1000 Genomes Project Consortium et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 132 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 132 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 53 SVs from 10 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv3310549 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 74,732,928 | 74,734,496 | 74,732,928 | 74,734,496 |
| esv3310549 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000017.10 | Chr17 | 72,729,067 | 72,730,635 | 72,729,067 | 72,730,635 |
| esv3310549 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000017.9 | Chr17 | 70,240,662 | 70,242,230 | 70,240,662 | 70,242,230 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7843543 | novel sequence insertion | SAMN00001696 | Sequencing | Paired-end mapping | 44,056 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv7843543 | Remapped | Perfect | NC_000017.11:g.(74 732928_74734496)_( 74732928_74734496) ins1093 | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 74,732,928 | 74,734,496 | 74,732,928 | 74,734,496 |
| essv7843543 | Remapped | Perfect | NC_000017.10:g.(72 729067_72730635)_( 72729067_72730635) ins1093 | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 72,729,067 | 72,730,635 | 72,729,067 | 72,730,635 |
| essv7843543 | Submitted genomic | NC_000017.9:g.(702 40662_70242230)_(7 0240662_70242230)i ns1093 | NCBI36 (hg18) | NC_000017.9 | Chr17 | 70,240,662 | 70,242,230 | 70,240,662 | 70,242,230 |