esv34041
- Organism: Homo sapiens
- Study:estd49 (Gusev et al. 2008)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:150,762
- Publication(s):Gusev et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 501 SVs from 49 studies. See in: genome view
Overlapping variant regions from other studies: 501 SVs from 49 studies. See in: genome view
Overlapping variant regions from other studies: 184 SVs from 15 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv34041 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 33,428,525 | 33,579,286 |
| esv34041 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 33,720,726 | 33,871,487 |
| esv34041 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000015.8 | Chr15 | 31,508,018 | 31,658,779 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv6990604 | copy number loss | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv6990604 | Remapped | Perfect | NC_000015.10:g.(?_ 33428525)_(3357928 6_?)del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 33,428,525 | 33,579,286 |
| essv6990604 | Remapped | Perfect | NC_000015.9:g.(?_3 3720726)_(33871487 _?)del | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 33,720,726 | 33,871,487 |
| essv6990604 | Submitted genomic | NC_000015.8:g.(?_3 1508018)_(31658779 _?)del | NCBI36 (hg18) | NC_000015.8 | Chr15 | 31,508,018 | 31,658,779 |