esv34114
- Organism: Homo sapiens
- Study:estd49 (Gusev et al. 2008)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:47,580
- Publication(s):Gusev et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 210 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 210 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 48 SVs from 15 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv34114 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 62,579,972 | 62,627,551 |
| esv34114 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 62,872,171 | 62,919,750 |
| esv34114 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000015.8 | Chr15 | 60,659,463 | 60,707,042 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv6990645 | copy number loss | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv6990645 | Remapped | Perfect | NC_000015.10:g.(?_ 62579972)_(6262755 1_?)del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 62,579,972 | 62,627,551 |
| essv6990645 | Remapped | Perfect | NC_000015.9:g.(?_6 2872171)_(62919750 _?)del | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 62,872,171 | 62,919,750 |
| essv6990645 | Submitted genomic | NC_000015.8:g.(?_6 0659463)_(60707042 _?)del | NCBI36 (hg18) | NC_000015.8 | Chr15 | 60,659,463 | 60,707,042 |