esv34127
- Organism: Homo sapiens
- Study:estd49 (Gusev et al. 2008)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:440,017
- Publication(s):Gusev et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 839 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 839 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 275 SVs from 19 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv34127 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 78,661,992 | 79,102,008 |
| esv34127 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 78,373,037 | 78,813,053 |
| esv34127 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 78,050,685 | 78,490,701 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv6990555 | copy number loss | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv6990555 | Remapped | Perfect | NC_000011.10:g.(?_ 78661992)_(7910200 8_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 78,661,992 | 79,102,008 |
| essv6990555 | Remapped | Perfect | NC_000011.9:g.(?_7 8373037)_(78813053 _?)del | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 78,373,037 | 78,813,053 |
| essv6990555 | Submitted genomic | NC_000011.8:g.(?_7 8050685)_(78490701 _?)del | NCBI36 (hg18) | NC_000011.8 | Chr11 | 78,050,685 | 78,490,701 |