esv34143
- Organism: Homo sapiens
- Study:estd49 (Gusev et al. 2008)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:150,286
- Publication(s):Gusev et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 490 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 490 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 140 SVs from 19 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv34143 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 74,179,080 | 74,329,365 |
| esv34143 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 75,938,838 | 76,089,123 |
| esv34143 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000010.9 | Chr10 | 75,608,844 | 75,759,129 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv6990639 | copy number loss | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv6990639 | Remapped | Perfect | NC_000010.11:g.(?_ 74179080)_(7432936 5_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 74,179,080 | 74,329,365 |
| essv6990639 | Remapped | Perfect | NC_000010.10:g.(?_ 75938838)_(7608912 3_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 75,938,838 | 76,089,123 |
| essv6990639 | Submitted genomic | NC_000010.9:g.(?_7 5608844)_(75759129 _?)del | NCBI36 (hg18) | NC_000010.9 | Chr10 | 75,608,844 | 75,759,129 |