esv34164
- Organism: Homo sapiens
- Study:estd49 (Gusev et al. 2008)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:104,436
- Publication(s):Gusev et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 357 SVs from 47 studies. See in: genome view
Overlapping variant regions from other studies: 357 SVs from 47 studies. See in: genome view
Overlapping variant regions from other studies: 141 SVs from 17 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv34164 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 123,414,855 | 123,519,290 |
| esv34164 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 125,174,371 | 125,278,806 |
| esv34164 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000010.9 | Chr10 | 125,164,361 | 125,268,796 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv6990679 | copy number loss | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv6990679 | Remapped | Perfect | NC_000010.11:g.(?_ 123414855)_(123519 290_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 123,414,855 | 123,519,290 |
| essv6990679 | Remapped | Perfect | NC_000010.10:g.(?_ 125174371)_(125278 806_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 125,174,371 | 125,278,806 |
| essv6990679 | Submitted genomic | NC_000010.9:g.(?_1 25164361)_(1252687 96_?)del | NCBI36 (hg18) | NC_000010.9 | Chr10 | 125,164,361 | 125,268,796 |