esv34167
- Organism: Homo sapiens
- Study:estd49 (Gusev et al. 2008)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:173,398
- Publication(s):Gusev et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 572 SVs from 58 studies. See in: genome view
Overlapping variant regions from other studies: 572 SVs from 58 studies. See in: genome view
Overlapping variant regions from other studies: 186 SVs from 18 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv34167 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 122,074,661 | 122,248,058 |
| esv34167 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 123,834,176 | 124,007,573 |
| esv34167 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000010.9 | Chr10 | 123,824,166 | 123,997,563 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv6990713 | copy number loss | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv6990713 | Remapped | Perfect | NC_000010.11:g.(?_ 122074661)_(122248 058_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 122,074,661 | 122,248,058 |
| essv6990713 | Remapped | Perfect | NC_000010.10:g.(?_ 123834176)_(124007 573_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 123,834,176 | 124,007,573 |
| essv6990713 | Submitted genomic | NC_000010.9:g.(?_1 23824166)_(1239975 63_?)del | NCBI36 (hg18) | NC_000010.9 | Chr10 | 123,824,166 | 123,997,563 |