esv3571105
- Organism: Homo sapiens
- Study:estd212 (Uddin et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:440,421
- Publication(s):Uddin et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1109 SVs from 72 studies. See in: genome view
Overlapping variant regions from other studies: 1109 SVs from 72 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3571105 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 61,776,757 | 62,217,177 |
| esv3571105 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 62,486,662 | 62,927,082 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| essv9779604 | copy number loss | SNP array | Probe signal intensity | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv9779604 | Remapped | Perfect | NC_000006.12:g.(?_ 61776757)_(6221717 7_?)del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 61,776,757 | 62,217,177 |
| essv9779604 | Submitted genomic | NC_000006.11:g.(?_ 62486662)_(6292708 2_?)del | GRCh37 (hg19) | NC_000006.11 | Chr6 | 62,486,662 | 62,927,082 |