esv3584576
- Organism: Homo sapiens
- Study:estd213 (Mokhtar et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:13,292
- Publication(s):Mokhtar et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 838 SVs from 89 studies. See in: genome view
Overlapping variant regions from other studies: 838 SVs from 89 studies. See in: genome view
Overlapping variant regions from other studies: 399 SVs from 28 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3584576 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 18,927,525 | 18,940,816 |
| esv3584576 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 18,949,072 | 18,962,363 |
| esv3584576 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 18,905,648 | 18,918,939 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv9838277 | copy number gain | KSF005 | SNP array | Probe signal intensity | 45 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv9838277 | Remapped | Perfect | NC_000011.10:g.(?_ 18927525)_(1894081 6_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 18,927,525 | 18,940,816 |
| essv9838277 | Remapped | Perfect | NC_000011.9:g.(?_1 8949072)_(18962363 _?)dup | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 18,949,072 | 18,962,363 |
| essv9838277 | Submitted genomic | NC_000011.8:g.(?_1 8905648)_(18918939 _?)dup | NCBI36 (hg18) | NC_000011.8 | Chr11 | 18,905,648 | 18,918,939 |