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dbVar

Database of genomic structural variation

esv3592631

Organism: Homo sapiens

Study:estd214 (1000 Genomes Consortium Phase 3)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:192,319

Publication(s):1000 Genomes Project Consortium et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 681 SVs from 65 studies. See in: genome view

Remapped(Score: Perfect):137,572,806-137,765,124

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv3592631	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000002.12	Chr2	137,572,806	137,765,124
esv3592631	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000002.11	Chr2	138,330,376	138,522,694

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
essv10687107	deletion	SAMN00001044	Sequencing	Read depth and paired-end mapping	Heterozygous	3,190

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv10687107	Remapped	Perfect	NC_000002.12:g.137 572806_137765124de l	GRCh38.p12	First Pass	NC_000002.12	Chr2	137,572,806	137,765,124
essv10687107	Submitted genomic		NC_000002.11:g.138 330376_138522694de l	GRCh37 (hg19)		NC_000002.11	Chr2	138,330,376	138,522,694

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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