esv3593257
- Organism: Homo sapiens
- Study:estd214 (1000 Genomes Consortium Phase 3)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:280,264
- Publication(s):1000 Genomes Project Consortium et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 844 SVs from 68 studies. See in: genome view
Overlapping variant regions from other studies: 844 SVs from 68 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
esv3593257 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 166,648,099 | 166,928,362 |
esv3593257 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000002.11 | Chr2 | 167,504,609 | 167,784,872 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
---|---|---|---|---|---|---|
essv10749212 | duplication | SAMN00009199 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,710 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
essv10749212 | Remapped | Perfect | NC_000002.12:g.166 648099_166928362du p | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 166,648,099 | 166,928,362 |
essv10749212 | Submitted genomic | NC_000002.11:g.167 504609_167784872du p | GRCh37 (hg19) | NC_000002.11 | Chr2 | 167,504,609 | 167,784,872 |