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dbVar

Database of genomic structural variation

esv3610999

Organism: Homo sapiens

Study:estd214 (1000 Genomes Consortium Phase 3)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:256,205

Publication(s):1000 Genomes Project Consortium et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 892 SVs from 66 studies. See in: genome view

Remapped(Score: Perfect):140,317,585-140,573,789

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv3610999	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	140,317,585	140,573,789
esv3610999	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	140,638,722	140,894,926

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
essv12568537	deletion	SAMN00007774	Sequencing	Read depth and paired-end mapping	Heterozygous	2,185

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv12568537	Remapped	Perfect	NC_000006.12:g.140 317585_140573789de l	GRCh38.p12	First Pass	NC_000006.12	Chr6	140,317,585	140,573,789
essv12568537	Submitted genomic		NC_000006.11:g.140 638722_140894926de l	GRCh37 (hg19)		NC_000006.11	Chr6	140,638,722	140,894,926

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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