esv3647719

Organism: Homo sapiens

Study:estd214 (1000 Genomes Consortium Phase 3)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:28
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):1000 Genomes Project Consortium et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 112 SVs from 26 studies. See in: genome view

Remapped(Score: Perfect):37,817,186-37,817,186

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv3647719	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
esv3647719	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000022.10	Chr22	38,213,193	38,213,193

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
essv16421179	sva insertion	SAMN00262980	Sequencing	Read depth and paired-end mapping	Heterozygous	2,988
essv16421180	sva insertion	SAMN00630220	Sequencing	Read depth and paired-end mapping	Heterozygous	3,027
essv16421181	sva insertion	SAMN01761208	Sequencing	Read depth and paired-end mapping	Heterozygous	3,316
essv16421182	sva insertion	SAMN00779942	Sequencing	Read depth and paired-end mapping	Heterozygous	3,199
essv16421183	sva insertion	SAMN00779954	Sequencing	Read depth and paired-end mapping	Heterozygous	3,099
essv16421184	sva insertion	SAMN01090760	Sequencing	Read depth and paired-end mapping	Heterozygous	3,134
essv16421185	sva insertion	SAMN01761225	Sequencing	Read depth and paired-end mapping	Heterozygous	3,305
essv16421186	sva insertion	SAMN01036752	Sequencing	Read depth and paired-end mapping	Heterozygous	3,109
essv16421187	sva insertion	SAMN01761229	Sequencing	Read depth and paired-end mapping	Heterozygous	3,411
essv16421188	sva insertion	SAMN01090797	Sequencing	Read depth and paired-end mapping	Heterozygous	2,871
essv16421189	sva insertion	SAMN01761239	Sequencing	Read depth and paired-end mapping	Heterozygous	3,286
essv16421190	sva insertion	SAMN01090773	Sequencing	Read depth and paired-end mapping	Heterozygous	2,777
essv16421191	sva insertion	SAMN01036818	Sequencing	Read depth and paired-end mapping	Heterozygous	3,167
essv16421192	sva insertion	SAMN01761295	Sequencing	Read depth and paired-end mapping	Heterozygous	3,217
essv16421193	sva insertion	SAMN01090882	Sequencing	Read depth and paired-end mapping	Heterozygous	3,051
essv16421194	sva insertion	SAMN01090754	Sequencing	Read depth and paired-end mapping	Heterozygous	2,921
essv16421195	sva insertion	SAMN01090846	Sequencing	Read depth and paired-end mapping	Heterozygous	3,080
essv16421196	sva insertion	SAMN01090807	Sequencing	Read depth and paired-end mapping	Heterozygous	3,066
essv16421197	sva insertion	SAMN01090793	Sequencing	Read depth and paired-end mapping	Heterozygous	2,951
essv16421198	sva insertion	SAMN01761264	Sequencing	Read depth and paired-end mapping	Heterozygous	2,514
essv16421199	sva insertion	SAMN00001673	Sequencing	Read depth and paired-end mapping	Heterozygous	3,256
essv16421200	sva insertion	SAMN00001687	Sequencing	Read depth and paired-end mapping	Heterozygous	2,530
essv16421201	sva insertion	SAMN00001339	Sequencing	Read depth and paired-end mapping	Heterozygous	3,222
essv16421202	sva insertion	SAMN00000574	Sequencing	Read depth and paired-end mapping	Heterozygous	3,099
essv16421203	sva insertion	SAMN00000575	Sequencing	Read depth and paired-end mapping	Heterozygous	3,345
essv16421204	sva insertion	SAMN00001115	Sequencing	Read depth and paired-end mapping	Heterozygous	2,431
essv16421205	sva insertion	SAMN00001186	Sequencing	Read depth and paired-end mapping	Heterozygous	3,005
essv16421206	sva insertion	SAMN00007735	Sequencing	Read depth and paired-end mapping	Heterozygous	3,097

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv16421179	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421180	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421181	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421182	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421183	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421184	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421185	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421186	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421187	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421188	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421189	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421190	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421191	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421192	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421193	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421194	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421195	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421196	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421197	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421198	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421199	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421200	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421201	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421202	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421203	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421204	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421205	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421206	Remapped	Perfect	NC_000022.11:g.378 17186_37817187ins?	GRCh38.p12	First Pass	NC_000022.11	Chr22	37,817,186	37,817,186
essv16421179	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421180	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421181	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421182	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421183	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421184	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421185	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421186	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421187	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421188	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421189	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421190	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421191	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421192	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421193	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421194	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421195	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421196	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421197	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421198	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421199	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421200	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421201	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421202	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421203	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421204	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421205	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193
essv16421206	Submitted genomic		NC_000022.10:g.382 13193_38213194ins?	GRCh37 (hg19)		NC_000022.10	Chr22	38,213,193	38,213,193

dbVar

Database of genomic structural variation

esv3647719

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.