esv3647890
- Organism: Homo sapiens
- Study:estd214 (1000 Genomes Consortium Phase 3)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):1000 Genomes Project Consortium et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 177 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 177 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3647890 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 44,176,753 | 44,176,753 |
| esv3647890 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000022.10 | Chr22 | 44,572,633 | 44,572,633 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| essv16437004 | alu insertion | SAMN01761302 | Sequencing | Read depth and paired-end mapping | Heterozygous | 3,284 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv16437004 | Remapped | Perfect | NC_000022.11:g.441 76753_44176754ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 44,176,753 | 44,176,753 |
| essv16437004 | Submitted genomic | NC_000022.10:g.445 72633_44572634ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 44,572,633 | 44,572,633 |